MUST2 SAMURAI_2018 S3-LEB-LPC SUPERNEMO MUGAST EXPAND SCALP GALATRON HiCARI VELO
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Message ID: 5162     Entry time: Fri Jul 19 15:11:10 2019
Author: mugast 
ExpNbr: e768s 
Type: OFFLINE 
Category: General 
Status: Fixed 
Target-Source:  
Subject: Procedure for run conversion and analysis 
Here is the procedure to convert a run with VAMOS and AGATA data and add those data to the Kinematic plot.

Every 4GB there will be a file change, to see if there is a file change type:

ls -ltrh /data/mugastX/e768s/acquisition/run/

Convert the last 4GB file and add it to the chain through the following steps:

Open a terminal from one of the Mugast computer:
Type: source $HOME/GoToVamosAna
Type: MyVAna -d2Ar -f /data/mugastX/e768s/acquisition/run/run_$$$$-DD-MM-YY.HHhMMmSSs /data/mugastX/e768s/acquisition/run/RootA/r$$$$_000a.root

OR (in case the run is split in more files)

Type: MyVAna -d2Ar -f /data/mugastX/e768s/acquisition/run/run_$$$$-DD-MM-YY.HHhMMmSSs.N /data/mugastX/e768s/acquisition/run/RootA/r$$$$_00Na.root

(If you get the error "Could not find the BrhoRef for the run <RunNr> ", update the ./Calibs/ListBrho.dat file with relevant Brho for RunNr)

Now you would be already able to run npanalysis to analyze the data VAMOS+Mugast with the following procedure:

Type: exit (to exit the VAMOS environment)
Type: lpcgrit (to load the analysis environment)
Type: npp MUGAST
Edit the exe_e768s.sh to specify which runs to analyze. The command should be the following:

npanalysis -D mugast.detector -C Calibration.txt -E ./Reaction/15N7Lit.reaction -T /data/mugastX/e768s/acquisition/run/RootA/r$$$$_00Na.root AD -O run_$$$$_N.root

Type: ./exe_e768s.sh

To convert a run including the AGATA data, the procedure is the following:
Go to the AGATA analysis computer (last on the right close to the window in the acquisition room), open a terminal and type the following commands:

> a4
> t e768s
> cd Replay
>./do_global_replay.sh -run ## (## is the number of the run you want to convert).

When it is finished, copy the root file to the GANIL world:

> mkdir /dataganil/e768s/acquisition/root_agata/run_00##/
> cp ./run_00##/Out/Analysis/Tree_00*.root /dataganil/e768s/acquisition/root_agata/run_00##/.

Now you can analyze the file using npanalysis.
The command in the exe_e768s.sh file should now look like:

npanalysis -D mugast.detector -C Calibration.txt -E ./Reaction/15N7Lit.reaction -T /data/mugastX/e768s/acquisition/root_agata/run_00##/Tree_000N.root TreeMaster -O run_00##_N_agata.root

The run will be created in the ./NPOutputs folder.
Bon courage!

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